rs240906366 SNP Detail

Summary

• ID
  rs240906366
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:118353860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCA CATGCGAATG AGCAGGCAAA
  Y
  AAACTTGACA TGACCATTAA GAAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320901477	CHEV_3_118263129	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240906366					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:118353860 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13752	CpG island 13752	1821 bp proximal
Dpyd	dihydropyrimidine dehydrogenase	1918 bp upstream
Rr583905	regulatory region 583905	1452 bp proximal
Rr583906	regulatory region 583906	1980 bp proximal
Tssr31414	transcription start site region 31414	1934 bp upstream
Tssr31415	transcription start site region 31415	1951 bp upstream