CTACACTGTT ATACATTCTT ACTAAGTCTT CACATCTCAC ATGGTTAAGT TTCTGTTTCC TAAGCCTAAT GTATCCTGAA GACCATGTTT TTCAACCTAT GTGGAACTAG TGACCCCATG ATATATACCC ACTCCTTTGC CTTGCTAAAC TGAACCTGTG ACATAGGATT GCCCCATGAA AATGTGTCTT CCCAGATACA M TGATGCCTCC CCTTGCACAT GATGCATGCT TGCACTTCTC ACGGGCAGCC TTGAGCCCTT CTGTCCAGGT GCTAGCAAGA AATTATCTTG GCAGCCGTTT TGTTTTATTT TGGTCAATCT TAACCCTTCC CTCAAAAGTC AATGAGGTGG TGCCCTCTGA AACCCTGACT TTCAGAGCAG GAGCTGGCTG GCCACTTCTA M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129P2/OlaHsd |
129S1/SvImJ |
129S5/SvEvBrd |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LEWES/EiJ |
LG/J |
LP/J |
MA/MyJ |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SPRET/EiJ |
ST/bJ |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss369190340 | MGP_WTSI_6_91709801 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SNP | Consensus Type | 129P2/OlaHsd |
129S1/SvImJ |
129S5/SvEvBrd |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LEWES/EiJ |
LG/J |
LP/J |
MA/MyJ |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SPRET/EiJ |
ST/bJ |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
||||
rs240911997 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss369190340 | MGP_WTSI_6_91709801 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/C |
Location: Chr6:91736788 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Grip2 | glutamate receptor interacting protein 2 | 1702 bp downstream | ||||||
Rr141761 | regulatory region 141761 | 1388 bp distal | ||||||
Rr379752 | regulatory region 379752 | 622 bp downstream | ||||||
Slc6a6 | solute carrier family 6 (neurotransmitter transporter, taurine), member 6 | 744 bp downstream | ||||||
Tssr57753 | transcription start site region 57753 | 1978 bp downstream | ||||||
Tssr57754 | transcription start site region 57754 | 1882 bp downstream | ||||||
Tssr57755 | transcription start site region 57755 | 1786 bp downstream | ||||||
Tssr57756 | transcription start site region 57756 | 1746 bp downstream | ||||||
Tssr57757 | transcription start site region 57757 | 1721 bp downstream | ||||||
Tssr57758 | transcription start site region 57758 | 1685 bp downstream | ||||||
Tssr57759 | transcription start site region 57759 | 1461 bp downstream | ||||||
Tssr57760 | transcription start site region 57760 | 1405 bp downstream | ||||||
Tssr57761 | transcription start site region 57761 | 1388 bp downstream | ||||||
Tssr57762 | transcription start site region 57762 | 1347 bp downstream | ||||||
Tssr57763 | transcription start site region 57763 | 1323 bp downstream | ||||||
Tssr57764 | transcription start site region 57764 | 1299 bp downstream | ||||||
Tssr57765 | transcription start site region 57765 | 1266 bp downstream | ||||||
Tssr57766 | transcription start site region 57766 | 1240 bp downstream | ||||||
Tssr57767 | transcription start site region 57767 | 1169 bp downstream | ||||||
Tssr57768 | transcription start site region 57768 | 1159 bp downstream | ||||||
Tssr57769 | transcription start site region 57769 | 959 bp downstream | ||||||
Tssr57770 | transcription start site region 57770 | 848 bp downstream | ||||||
Tssr62095 | transcription start site region 62095 | 1455 bp upstream | ||||||
Tssr62096 | transcription start site region 62096 | 1173 bp upstream | ||||||
Tssr62097 | transcription start site region 62097 | 966 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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