rs240913662 SNP Detail

Summary

• ID
  rs240913662
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103367267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGACAGGCA GCATGTTCCA GGATTGGAGA
  ACAGCACCAC AAAGGACCAA CAGCACCTGT GGACAGCCCA GGTGTGTGTG AGAAAAGAAA
  GTGCAGTATG GCCGGGACAG TGGGCGGGAG GTAGGAGGGG AAGCCAGGAA GTGTTGAGAG
  R
  TATACCCCAG GGGTTTGTCG GAAGGGAGGC TACATGTGAC TTGGTGGTAT TTGTGGTTGC
  TACTGTGCTG TGCTTTAAGG ATGCACCAAG AAAGGGCTTT GCTCATCTGC TGGGGACAAA
  GACCAGCATT TGTGTTCAGT GACTCAGACC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323161337	CHEV_9_103392398	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240913662					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103367267 () rs orientation: forward

Symbol	Name	Function Class
Gm16252	predicted gene 16252	within coordinates
Rr192235	regulatory region 192235	134 bp proximal
Rr198519	regulatory region 198519	1534 bp proximal
Rr207116	regulatory region 207116	within coordinates
Tmem108	transmembrane protein 108	within coordinates
Tssr91216	transcription start site region 91216	758 bp upstream
Tssr91217	transcription start site region 91217	724 bp upstream
Tssr91218	transcription start site region 91218	692 bp upstream