rs240927371 SNP Detail

Summary

• ID
  rs240927371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115437472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTATGTCT GTGTGCATGA
  AGGCAGAGAT CAGAGGAATA GATTCCTTAG AGCTGGAGTT CTGTTGTGAA GCAACTGACA
  CTGGCGCTGG AAATCAAACT CCCGTCCTCT GAAACAACAA TACGCTCTTA ACCCCTGAGT
  CACCTCTCCA GACCCTAAAA TCTGTGTATT TTACTGTGTT GGTGTGAAGA AGAGGGGACA
  R
  TGGTGGAAAT CAGGATGGGA CAGGAGCTCC GACCTAAAGA TAATAAAGAA GGGGAAACGC
  TGTCCTGTTG AGACCCCTTG TGTCTTCAGC TTCTTTGTTT CCAGTAAAGA TTGACAATCC
  ATCCCATAAC CTTCCTGGGA GAAAGGCCAG AAAACTCTTT GTAGGTTTTA GGATCTTTGT
  CAAGTAAGAT AAAAAAGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320892538	CHEV_3_115346741	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240927371					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115437472 () rs orientation: forward

Symbol	Name	Function Class
Rr65100	regulatory region 65100	929 bp proximal
Rr367536	regulatory region 367536	1385 bp downstream
Rr367537	regulatory region 367537	817 bp downstream
Rr397953	regulatory region 397953	669 bp upstream