rs240944507 SNP Detail

Summary

• ID
  rs240944507
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112686078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGATT GCAGGAGCAC ATGCGAATTT
  T
  AAATTTTCTG TCATTTCTGT AGTAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324170475	CHEV_12_113957855	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240944507					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112686078 () rs orientation: forward

Symbol	Name	Function Class
Cep170b	centrosomal protein 170B	1872 bp upstream
Cpgi5179	CpG island 5179	1616 bp proximal
Gm46382	predicted gene, 46382	within coordinates
Gm59466	predicted gene, 59466	within coordinates
Rr473583	regulatory region 473583	996 bp proximal
Tssr115398	transcription start site region 115398	388 bp downstream
Tssr115399	transcription start site region 115399	1461 bp upstream
Tssr115400	transcription start site region 115400	1860 bp upstream