rs240956980 SNP Detail

Summary

• ID
  rs240956980
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4294419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCATTAAGA GCTGGGAGAT
  AGCTCAGTGC TAAAACTCTT GCCTAGCAAC CATGGGACTG ATTCTCCAGA ACTCTTATAA
  GATTCCAAGT GGATGTGGTG CTCTCCTCTA TCTCCAGCCT TGTCGGCAGA CAGGGGATCC
  CCAGAATAAT CCGGCAGGTG AAAATAGCCA TATTGGTGAG CTCTGATCTG ATGGAGAGAC
  Y
  CTCCCCTAGG AAATGAGGTA CAATTGCTAA GAGGATGAAG CCTGATAAAA ACCTCAGGTT
  TGCACACACA CACACACACA CACACACACA CACACACACA CACCCATGCA AACAAGAATA
  AACATATACA TTCATACATA TATTTATTCA TTCACTCAAT ATATATATTC ATGAGCTAAA
  GCTCTTCTTT TTATTGTGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324213460	CHEV_13_4243666	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240956980					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4294419 () rs orientation: forward

Symbol	Name	Function Class
Akr1c19	aldo-keto reductase family 1, member C19	within coordinates
Gm61344	predicted gene, 61344	within coordinates
Rr474456	regulatory region 474456	538 bp proximal