rs240991012 SNP Detail

Summary

• ID
  rs240991012
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39370819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGTCACA GCAGGTAATT
  GTGTGAGTAT ATGCTGCCCA CTGAAGTGCT CAGGACAGGT GTGGCACAAA AACAGAAACT
  GTGTTTTTTC TGTGATTCAC CCTTCCCAAT GTACTAGAGA GCCAAGAATC ATTCCAGTGT
  CCTTAGCTAA ATTAGGCAAA AAAAAAAAAA AAACACACAA AAGGAACCCA AACACACCAA
  Y
  ACTGAAGGAA AAAGTTATGT TTTAATGCTG AAAAGCAAAG AAAACTGGGT TTAAATTTCA
  CAGATTGTGT TTTATTAAAA GAAAGAGAAG CCAGAGATGT TTTGTGGAGT GCAGTATGTG
  TGAAGGAAGG GAGTGCCTCT GCAGGGTCAT GCTGAGGCAT CCCTTCCCCC TGAGGTACCA
  CTCACAGGAT GGTATAGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228540	CHEV_2_39336327	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240991012					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39370819 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	779 bp proximal
Rr373076	regulatory region 373076	821 bp downstream