rs240994995 SNP Detail

Summary

• ID
  rs240994995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:93774853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAG GATAGAAGGG GGGGGGGGGG
  R
  GGAAGTGCAC GGAAAGCTAA AGACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323810018	CHEV_11_93745341	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240994995					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:93774853 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3539	CpG island 3539	795 bp proximal
Gm72169	predicted gene, 72169	within coordinates
Mbtd1	mbt domain containing 1	1825 bp upstream
Rr247507	regulatory region 247507	within coordinates
Rr366736	regulatory region 366736	1657 bp upstream
Tssr3641	transcription start site region 3641	1797 bp upstream
Tssr104149	transcription start site region 104149	1075 bp upstream
Tssr104150	transcription start site region 104150	1244 bp upstream
Tssr104151	transcription start site region 104151	1857 bp upstream
Tssr110106	transcription start site region 110106	235 bp downstream
Tssr110107	transcription start site region 110107	1633 bp downstream
Tssr110108	transcription start site region 110108	1697 bp downstream
Tssr110109	transcription start site region 110109	1725 bp downstream
Utp18	UTP18 small subunit processome component	within coordinates