rs240995106 SNP Detail

Summary

• ID
  rs240995106
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90491099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCT TTGCATAAGA GTACAGGGCA
  Y
  GGGCAGAGGT TTGGGGGCAT GAAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320838074	CHEV_3_90387714	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240995106					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90491099 () rs orientation: forward

Symbol	Name	Function Class
Rr854	regulatory region 854	241 bp proximal
Rr69093	regulatory region 69093	1099 bp distal
Rr69094	regulatory region 69094	102 bp proximal
Rr69095	regulatory region 69095	1702 bp proximal
Rr81998	regulatory region 81998	within coordinates
Rr83342	regulatory region 83342	1361 bp distal
Rr367471	regulatory region 367471	1485 bp upstream
S100a3	S100 calcium binding protein A3	867 bp upstream