rs240998461 SNP Detail

Summary

• ID
  rs240998461
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61929066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACAAAGCA CAGAGGAACG
  GGGGCACCTG CTAGAACATC TGCATGTCTC CATGGCTATT ACAACCCCTG CCTACCTGGC
  TACCTCTAAT TCACTTTGTT CCTTACCGGT TCCACTCCAT CCCCACTTCC AGGTCCTCAG
  TAAGACGAGC TCTTATCCAC CCCATGCCTC TGCACATGCT GTTTCCCTGG GCCTAGATTG
  Y
  TCCTCCTTCT GCCCTCTGGC TGGTCATTTT CCTCTCTCGC TGGGTATTCA CGGGGAGTTC
  CTTTCCCGTA GCATCCCGTT TTCTGTCTCC GTAGGAGCTG TCTCCATGTG CTCTCTCTGT
  TTACTTACTT AGAACATGTT TCTTCTCTAG ACCTGCACAT GGGAGGCGCA TCTTCCATAC
  TGTTTATCTG GCAGCACATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325645800	CHEV_18_61955649	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240998461					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61929066 () rs orientation: forward

Symbol	Name	Function Class
Gm35919	predicted gene, 35919	within coordinates
Rr346545	regulatory region 346545	1666 bp distal
Rr356351	regulatory region 356351	1858 bp distal