rs241011998 SNP Detail

Summary

• ID
  rs241011998
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172893633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC ACATGCAGCA GGCTGGCCAA
  W
  ACACCAACCA GCACCTCCCC CCCCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320621372	CHEV_2_172877341	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241011998					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172893633 () rs orientation: forward

Symbol	Name	Function Class
Gm36337	predicted gene, 36337	907 bp upstream
Gm74627	predicted gene, 74627	within coordinates
Gm74628	predicted gene, 74628	1970 bp downstream
Rr407004	regulatory region 407004	89 bp proximal
Rr571825	regulatory region 571825	1580 bp distal
Rr571826	regulatory region 571826	1704 bp distal
Rr571827	regulatory region 571827	918 bp distal
Rr571828	regulatory region 571828	528 bp distal
Rr571829	regulatory region 571829	627 bp distal
Rr571830	regulatory region 571830	1888 bp proximal