rs241030826 SNP Detail

Summary

• ID
  rs241030826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96514001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACGTCCCCC ACGAACGGAC
  CTCTAGGTCC CCAGATGCTC AAGGAAAAGA AAAGTCCCCA GTCAGAATGA CTCCAGGTTC
  CAGGAAAAAG TTTGGCATTT TGGCAAACGT CAAGAGATGT ATTAGAGACT CTTCCAGCGG
  TGTCTAGATG CTCCCGCAGT GCGGCACGTG GGGGACAAAC CACATACTCA ACCTTTGCTC
  Y
  GGGAACATTG CTCTGCAAAA AGTTGGGTCA AGAAAAGGAC CACAGACTCC GTCCAGTCCT
  GTCTGAGACC CAGAGAAATT TTGAGTTTAT CACCAGTTTT GCATTTCAGA ATCGGAACGG
  TGACCTCTTT CCCACTCCCA GAAGCAGGCT TTTTAGAAAG TAGATTGGCC CTGGGAAGTT
  TGTAAATCTT CAACTAGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111050	CHEV_9_96532367	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241030826					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96514001 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	within coordinates
Rasa2	RAS p21 protein activator 2	336 bp upstream
Rr684997	regulatory region 684997	within coordinates
Tssr86611	transcription start site region 86611	918 bp downstream
Tssr90973	transcription start site region 90973	1303 bp upstream
Tssr90974	transcription start site region 90974	1048 bp upstream
Tssr90975	transcription start site region 90975	752 bp upstream
Tssr90976	transcription start site region 90976	394 bp upstream