rs241048288 SNP Detail

Summary

• ID
  rs241048288
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:119145249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGATCTT CCTTCCTTCC
  ATGTCGCCAG GATCTGGTAC CAATCAGTAC CTAAGTACTG TGCCTTAGTA CTTCTCATAA
  ATACTGTGCC TTAGTACTTC TCAGTTGTAG GAATGATGAC CAAGATCCAC AGCTGCCTTT
  TGGTGCTAAT AAAGTTTTAC TGGCACATGG TGACACCCTT CGACAGTGTT GCTTGCATGC
  Y
  ACAACAGCAC CCTTAAATAT GTAGCTAGGA CAGAGAAAGT ATGTGTCTTG CAGTAGTTGG
  CTAACCTCTA ACCAAGTGGA TTAATTAGCT CCCTGTTTTG CTTTTTGCAC CTAGCAAACA
  TATAACCTGT GCAGTCTCTA TATTCAATAG AGGGTCTGGA TAAATGACTC TGACTTCTCA
  CTTCTCTGGG TGCATAAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321664023	CHEV_5_119457193	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241048288					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:119145249 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16442	CpG island 16442	755 bp distal
Rr619043	regulatory region 619043	543 bp distal