rs241107241 SNP Detail

Summary

• ID
  rs241107241
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96514466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGAGGGA TGATTTCCTG
  GTCCTGAGGT TTAACTGCGC TGCCCTAAGA AGGAAGAAAC TGATTTAATA GAGCAGGGTT
  GTTCTTTGCC AGGTGCTAGA GTCAGCCAGT CAAGGAATGT TTTCAGACAT ATAGGAATGG
  CCCTAGGGCA AAAAGACGGG GCAGAAGGCG CCAAGACCAT GAGCACCTCA ACCTGGAAGG
  R
  CACACAGAGA GAAGAAGCAA GTTGTGGAAA CAGAGTCAAG GAGAGCCTGC CTGGGAAGAG
  TGAACAGACG ACAAGCAAGC CCAGAAGCCA CTTGTGCCAA GGCCAGTCAG GCAGACGGAG
  TGACCTAAGC TTGCTGGATG TCTTAGGCTA CCGAGCAATA CTTCCAGTCC AGCTGGTGAT
  GCATGAGGGT GCCCCTTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111053	CHEV_9_96532832	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241107241					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96514466 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	430 bp distal
Rasa2	RAS p21 protein activator 2	801 bp upstream
Rr684997	regulatory region 684997	306 bp distal
Tssr86611	transcription start site region 86611	1383 bp downstream
Tssr90973	transcription start site region 90973	1768 bp upstream
Tssr90974	transcription start site region 90974	1513 bp upstream
Tssr90975	transcription start site region 90975	1217 bp upstream
Tssr90976	transcription start site region 90976	859 bp upstream