rs241149017 SNP Detail

Summary

• ID
  rs241149017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110366622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCTGGGA TCAAAGGCAT
  GGACCACCAA GCCTGGCCTA GCAAACTAGT TTAATCACGG TTCTTTCACC AAGCCGATCA
  TGGGCAACTT TAAAGCAAGA AGAAAAAGAT GCAGCATACT ATTCATTAAA AGGAAAATAA
  TTTTCTGGGT TGATGGTATG TGCCTTTAAT CCCAGCAGTC TGGAGGCAGA AGGAGGGTCC
  R
  TATAGCAAAA TCCAGGTGAG CCAGGGCTGC ATAGTGAGAT CCTGTCGTAT TTTTAAATTA
  TTGCTTCATT TTTATCACAT CTTTAACATT TTAAGTGTGC TATGTAATGT ATATTAGCAG
  TCATGTGAGT ATCATTGATA AATATGTAGA TTGCAAGCAT CAGGCTATGA AGTAGAAAGA
  ATAAAATTTG GTGCTTAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322398766	CHEV_7_117910929	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241149017					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110366622 () rs orientation: forward

Symbol	Name	Function Class
Ampd3	adenosine monophosphate deaminase 3	791 bp upstream
B430319F04Rik	RIKEN cDNA B430319F04 gene	within coordinates
Cpgi19579	CpG island 19579	668 bp proximal
Rr653308	regulatory region 653308	378 bp proximal
Rr653309	regulatory region 653309	1006 bp proximal
Rr653310	regulatory region 653310	1507 bp proximal
Tssr68503	transcription start site region 68503	648 bp upstream
Tssr68504	transcription start site region 68504	691 bp upstream
Tssr68505	transcription start site region 68505	723 bp upstream
Tssr68506	transcription start site region 68506	754 bp upstream
Tssr68507	transcription start site region 68507	1200 bp upstream
Tssr68508	transcription start site region 68508	1415 bp upstream
Tssr74265	transcription start site region 74265	1886 bp downstream