rs241152363 SNP Detail

Summary

• ID
  rs241152363
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62492255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATC TCCAGGTTCA AGATCAGCCT
  G
  GTCTACAGAG CAAGTTCCAG GACCG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323704024	CHEV_11_62414931	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241152363					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62492255 () rs orientation: forward

Symbol	Name	Function Class
2410006H16Rik	RIKEN cDNA 2410006H16 gene	1448 bp upstream
Cpgi3027	CpG island 3027	1053 bp proximal
Rr402627	regulatory region 402627	1159 bp upstream
Rr448874	regulatory region 448874	791 bp proximal
Rr448875	regulatory region 448875	1459 bp proximal
Snord49b	small nucleolar RNA, C/D box 49B	1657 bp upstream
Trpv2	transient receptor potential cation channel, subfamily V, member 2	1124 bp downstream
Tssr102048	transcription start site region 102048	1438 bp upstream
Tssr102049	transcription start site region 102049	1528 bp upstream
Tssr102050	transcription start site region 102050	1632 bp upstream
Tssr102051	transcription start site region 102051	1686 bp upstream
Tssr102052	transcription start site region 102052	1752 bp upstream