rs241158538 SNP Detail

Summary

• ID
  rs241158538
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12730893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCCAGGAC AGCCAGGGCT ACAGAGAAAC CCTGTCTTGA
  AAAACCAAAA AAAAAAAAAA AAAAAAAAAA AGATTGAGCC TTGATCAGAA AAAAGAAATA
  T
  ATAAAATAAA ATTAAAAGAA ACCTTATAAT TGGTAAAAAA AAAAAATTAT TCAAATAAAG
  CTGAACATAG TGGCCCACAC CTTTATTCCC AGCAATAGG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322107105	CHEV_7_13582315	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241158538					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12730893 () rs orientation: forward

Symbol	Name	Function Class
Rr642427	regulatory region 642427	1174 bp proximal
Slc27a5	solute carrier family 27 (fatty acid transporter), member 5	within coordinates
Tssr70630	transcription start site region 70630	450 bp downstream
Tssr70631	transcription start site region 70631	701 bp downstream
Tssr70632	transcription start site region 70632	1144 bp downstream
Tssr70633	transcription start site region 70633	1174 bp downstream
Tssr70634	transcription start site region 70634	1206 bp downstream