rs241180915 SNP Detail

Summary

• ID
  rs241180915
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135936259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAAATGCT AAGCATCCAA ATGGGCGTGT
  TTATCACTTT CAAAGGTAAG TCAGATGAGA TCGACAATTt tttgtttttc attttaaatt
  tgtttttaaa gtttgtttgt ttgtttgttt aattttatct atatgagtac accgcagttg
  Y
  cttcagacat accagatgag ggcatcggat cccactacaa atggttgtga gtcaccatat
  ggttgcttga aattaaactc aggacctctg gaagagcaat cagtgctctt aactgctgaa
  ccaccactct gactccTCGA TATTATTTCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319994326	CHEV_1_137905098	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241180915					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135936259 () rs orientation: forward

Symbol	Name	Function Class
Cpgi801	CpG island 801	625 bp distal
Rr372097	regulatory region 372097	within coordinates
Tmem9	transmembrane protein 9	within coordinates