rs241181700 SNP Detail

Summary

• ID
  rs241181700
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60959504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCTCTTGG TTTGTTCAAT
  TCTCATTTTT CAAGGGCAAA GCTGTTACTC AAGATGAGGG CTCCACCTCA GCAATAATCT
  TATCATCTTC TACAGCCCTC AAAGTTTATA CACCAGTTGC TCCCTTACAA CAGTGTGGAC
  TTTGATACAA AGTTGATCTG CTTATTTTGT AAAATAAGAG GACTAATCTA GATGAATTCC
  Y
  AGTGAGCCAT CACCTTTATC TCACTGCTGG TATTCCCAGC AGTTCCTCTC TGTAACCAGT
  CCTCAAAATG AGTGCCATTT TTTTCTCTAC TCTCTTTGAA TTTCCCCCTT CTCTATTCTC
  TAAACACAGT AGTTCGGTAT GGACCCAGAC TTTGACTATT TTAGGTGCTA TGAACTAATT
  CTGTTACAGC TACTCACCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323327706	CHEV_10_60586473	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241181700					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60959504 () rs orientation: forward

Symbol	Name	Function Class
Gm55864	predicted gene, 55864	1412 bp downstream
Rr401931	regulatory region 401931	1590 bp downstream
Sgpl1	sphingosine phosphate lyase 1	within coordinates