rs241182015 SNP Detail

Summary

• ID
  rs241182015
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119181563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGCGGCTT ATAGTCAGGG
  CAGAAGCCAA GCCTTCCCTG CCCTCAGGAA TTTGGGGACC AGAGGAGACA AGAGTAAAAA
  TAAATAAATA AATTAATTAA TTAATTAAAA AAAAAAAAAA CCCTGCCCTT CTCACTTGGC
  ATGACCTGGA CTGAGGTTGT GTGTATGAGC TTAGGAGAGA TGGTTTGTAT CATGAGGGTG
  Y
  CCCTGCTAGG GACATCCACA GGCAGCTTTT CCTTCTACAG TGCCTCTGGC TGCTGTGGGG
  AGTTGGGCTG TGGAACATGA GTTGGCTAAG AATAGCAGGA TGGAGACTGG AACTTTGGCT
  AACAGGGTGG GAATTAGGCC AGAGCTCTGC ATCCTTTTGT GTTTCTCAAG TTCTGGGATT
  ACAGGCTCGT GCCTCCACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323218976	CHEV_9_119261615	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241182015					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119181563 () rs orientation: forward

Symbol	Name	Function Class
Rr688469	regulatory region 688469	91 bp distal
Rr688470	regulatory region 688470	475 bp distal
Rr688471	regulatory region 688471	222 bp distal