rs241208848 SNP Detail

Summary

• ID
  rs241208848
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112453991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTGCATT CCTGCAGTCA
  CCTGACCACA GTCTGTTGTC ATCCTTGGCA GTAAGACCTG TTGGATCAAT TCTTCACAAA
  GGCACAGTAA ACAGTTGGCT CCCTCATTCA AAGCAGTTTC GTACAACCTT AGTTCTTCTA
  GAAATAGCAT CTTTACAAAC CCAGGTGTTT GAAACTGAAC AGGTTTTAAT TGGGGGGGGG
  A
  TATGCAAAAT GAGGCATGAG AAGCCAATAT AAATGCAGTA GATGAGCACC AATGAAAAGG
  TATGGCTCTC CTTTCAATTG CAGGACAACA GTGGTGGGCA GGTTATGAGG GGGGCCACAT
  GAGAGCTAGT TCTGCATAGG GAAAGCTCCT GGTGGGAAGG AGGCAGCTAC TGCTGGATGC
  CAAGCAAGGG AGGGAGAGCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324529023	CHEV_13_113107665	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241208848					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112453991 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
Rr486335	regulatory region 486335	301 bp distal
Tssr121103	transcription start site region 121103	932 bp upstream
Tssr121104	transcription start site region 121104	959 bp upstream
Tssr121105	transcription start site region 121105	990 bp upstream