rs241247247 SNP Detail

Summary

• ID
  rs241247247
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88862625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cttcagaaa tttaaaaaac ccttagaaag
  acctaggaaa accagtgaga cacagattga ggaatttagg aaagaacttg ccactctgcc
  agtcacatga tgaaactgaa aggggctggc tcaagcttat tagaaaacca acctCagcct
  R
  gcatggtggc gcacgccttt aattccagca ctctcgaggc agaggcagga ggatttctga
  gttcgaggcc agcctggtct acaaagtgag ttccaggaca gccagggcta cacagagaaa
  ccctgtcttg aaaaaacaaa acaaaacaac                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323783377	CHEV_11_88833113	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241247247					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88862625 () rs orientation: forward

Symbol	Name	Function Class
2210409E12Rik	RIKEN cDNA 2210409E12 gene	858 bp upstream
Cpgi3523	CpG island 3523	1947 bp proximal
Gm10367	predicted gene 10367	577 bp downstream
Rr237596	regulatory region 237596	225 bp distal
Rr247482	regulatory region 247482	1575 bp proximal
Rr402857	regulatory region 402857	1451 bp downstream
Tssr104058	transcription start site region 104058	1536 bp downstream