rs241255271 SNP Detail

Summary

• ID
  rs241255271
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6004895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACGCATCT ATCTCTTTAA
  AAAACATCAC ACACAAACTC ACACACACTC AAACACAAAT ACACACACAC ACACACACAC
  TAGTTTATCT ACAATCTGTG CTGCCCTAAT CTATCTAAAC TTTGTTTGCA TCAAACCAGT
  TACTTTTACG CGTCAAGGAA ATGCAAATAA TGGAAGTTAC AGTCACTCCC CTAACACGTC
  S
  GTGCATTCGG TTTCAGTTTA AGAACTGTGG GTTTGCACTG ATTCTCGCCG CTCTAATCTC
  AGCCCATGTA CTGTGGGCAT CTCGCATTCA CAAGCAGCAC ACATTGGCAG TTCTCGCTGA
  TAACTTGGAG CGGATTCCCT ACAGATGAGT TCTTTGAATA TCCAAGGCAG AAAGGATTTG
  ATTGTTACAT TGTATGTTAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321730887	CHEV_6_5954895	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241255271					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6004895 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17134	CpG island 17134	765 bp proximal
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr407096	regulatory region 407096	1100 bp proximal
Rr626192	regulatory region 626192	within coordinates
Rr626193	regulatory region 626193	923 bp proximal