rs241273871 SNP Detail

Summary

• ID
  rs241273871
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:175795373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACAAAAT TTCCAAGCTT
  AACTCAGATA CACTGGTGGA GACTATAAAA TGAGAAAGAT CATGCTGTCT GAAGTGTCTT
  CGGGACATCT CATACAAACT TAATGGAGTT ATACTCCCAT GTCCTGAGAT TTTTTTCTTG
  GTTCCACACT ATCAATGAGT TAATTTCCTT TTGACATGCT TTGAATGTTT TTGTATTGGA
  R
  CTCTGCTTCT TTCTAGAGAT CAGTGTTTTA CTAAAACTGT TGCCTATAAA ATGAAGTTAT
  TTAATAATGT CTTATCCTAT GTTTACTAAG ACTCCAGAGT CATTGTTTGG AGCCATTCAT
  ATATTATCTC ATTTAATCAC CACACCATCA AAGGGTGGGT GCTATTATCC CCCTTTCACA
  GATAGGGAGA CTGAGGCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320153321	CHEV_1_177897938	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241273871					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175795373 () rs orientation: forward

Symbol	Name	Function Class
Pld5	phospholipase D family member 5	Intron
Rr423868	regulatory region 423868	1172 bp distal