rs241322838 SNP Detail

Summary

• ID
  rs241322838
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124154678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTGCATA CTGGGGTTGC
  CTGGTCTGAG GTTAGATTGT TGCTTACTGT GATGTAGTCC CAGGACGAGG ATGGTTTCCA
  GGATGCTCGG CCTGTGGTTT CGCAGCCCCA AGAGGCACAA TAGAAGGATT CTGGACCACC
  ACACGACCGG GCCCACCGGG GGCGATGTGG CCCGGGGCAG ACATAGAATC CTTCATTGTG
  K
  GCATGTGTCA CTTTAGATAA CTTAAGTCTG TTCCAGGCCG TATTGCACCG GGGAGTATAT
  GAAGTCAGGG GCTCCTCACA ATCTCTGGAA CAGCCTGGCG TGGAGTCGCT GCTTCCTGAA
  CAGCAGGGGG GCCCCGGGGG AGGAGAAAAA GGAGCCCGAT ATTCTAGGCC CCAATAGGAC
  GGCCCGTGGA GGGCCAACAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855353	CHEV_8_125951839	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241322838					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124154678 () rs orientation: forward

Symbol	Name	Function Class
Mela	melanoma antigen	within coordinates
Tssr2728	transcription start site region 2728	459 bp upstream
Tssr79965	transcription start site region 79965	471 bp upstream
Tssr83353	transcription start site region 83353	1200 bp upstream
Tssr83354	transcription start site region 83354	373 bp upstream
Tssr83355	transcription start site region 83355	280 bp upstream
Tssr83356	transcription start site region 83356	210 bp upstream
Tssr83357	transcription start site region 83357	91 bp upstream
Tssr83358	transcription start site region 83358	163 bp downstream
Tssr83359	transcription start site region 83359	1026 bp downstream
Tssr83360	transcription start site region 83360	1133 bp downstream
Tssr83361	transcription start site region 83361	1507 bp downstream
Tssr83362	transcription start site region 83362	1656 bp downstream