rs241328791 SNP Detail

Summary

• ID
  rs241328791
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70940448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAAAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  S
  CAAGAGGATG AGGAGGTTGA AGGCCTGGGA GGATGGAGGG GGAGGTAGAA TGAGAAGAGG
  AAGAAAACGG AAAGTGGGGG AGGGGAGGGG TAAAAAATG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322700311	CHEV_8_73011697	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241328791					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70940448 () rs orientation: forward

Symbol	Name	Function Class
1700020G03Rik	RIKEN cDNA 1700020G03 gene	383 bp upstream
Cpgi20459	CpG island 20459	304 bp distal
Cpgi20460	CpG island 20460	285 bp proximal
Cpgi20461	CpG island 20461	1489 bp proximal
Gm63942	predicted gene, 63942	1651 bp upstream
Gm64830	predicted gene, 64830	within coordinates
Gm64831	predicted gene, 64831	373 bp upstream
Rr186749	regulatory region 186749	within coordinates
Tmem59l	transmembrane protein 59-like	440 bp upstream
Tssr81617	transcription start site region 81617	573 bp upstream
Tssr81618	transcription start site region 81618	417 bp upstream
Tssr81619	transcription start site region 81619	317 bp downstream
Tssr81620	transcription start site region 81620	678 bp downstream
Tssr81621	transcription start site region 81621	713 bp downstream