rs241371972 SNP Detail

Summary

• ID
  rs241371972
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:95737496 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTACAG CAGCTTTGAA
  AGGAGAGAAA GATTTCAGGG GTGTGATCCC AGTCTGTGGG GCTGCTTCCA AGATCATCTG
  GAAGGTCTGT CTAGGTGTCT GTCTAGCATA AAGGAAGGCA TGAGTCTTAG TTGCTGTTCT
  GTTGCTGGAA AAAGAGACAC TATGACCAAG GCAACTTAGA GATTAACAGT TTATTGGGGG
  C
  TTGCTTACAG TTTCAGAGGG TTGGAATCCA TGACTATTAT GGCAGAGACC AAAGCGACAG
  GCAGGCAGGC ATGGCGCTGG TGAATTAGCT GAGTGCTTAC ATCTTGATCC ACAAGCACTG
  GACAGAGGGA AGAGAGACGA GTGAATGGGG AGACAGGGAG AACGGGGAGG GAAGAGAAGG
  AAGAGGAAGA GGGAGAGAGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323104506	CHEV_9_95755862	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241371972					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:95737496 () rs orientation: forward

Symbol	Name	Function Class
1700065D16Rik	RIKEN cDNA 1700065D16 gene	within coordinates
Cpgi22158	CpG island 22158	1937 bp proximal
Rr198098	regulatory region 198098	1896 bp distal
Rr206894	regulatory region 206894	1504 bp proximal
Rr211245	regulatory region 211245	1881 bp distal
Rr368834	regulatory region 368834	1967 bp upstream