rs241418989 SNP Detail

Summary

• ID
  rs241418989
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192922015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAACAGTA GCAAATTTAT
  AGTTGTGAAG TAGCAATGAA ATAAAGTTAT GGTTGGGGGT CACCACAACA TGAGGAGTGG
  TATTAAAGGG CACCAGTACC AGGAAGGCTG AGAACCCTAG AGCGAGTTTC CTCTCCATTG
  TTATGTTTTA GATCCCTTTT CCCAGCCAAC CACCCTGCTG TGTGTCCGTA AGTTATTCGA
  K
  TTTTATTTCT GCTTTTGGAT CCAATGATGC ACTGCCCTGT GGCTCTTAGT TATGATGGAA
  ACAGCGTCTT TTCTGTTCAT TATGACCAGG TCACTCTTGT GAAAAGACCG GAACTGGCTA
  CGCCTCAGCA GCTTTTCCTA TCCCTATCCT CTCCCAGGCA TGGCTCACAC ACCAGGTTTC
  CCACGGGCAT CCCGGGCTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320201224	CHEV_1_195065901	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241418989					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192922015 () rs orientation: forward

Symbol	Name	Function Class
1600010F14Rik	RIKEN cDNA 1600010F14 gene	within coordinates
D1Mit512	DNA Segment, Chr 1 Massachusetts Institute of Technology 512	1479 bp proximal
Hsd11b1	hydroxysteroid 11-beta dehydrogenase 1	within coordinates
Tssr15848	transcription start site region 15848	1800 bp downstream