rs241431744 SNP Detail

Summary

• ID
  rs241431744
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88133624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCATGGC CGGCCTCTCC
  TCGCTCTTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
  CTCTCTCTCT CTCTCTCTCT GCCTTTCTAC AATAAACGCC TTAAAATTAT GGACTGCCTC
  TTCCCATCTG ATTCCGCTGT GCTTGCGCCA TGGAGCAGGT CTTCCCCTAA TGAGCTGCGC
  R
  TCTAACCTGC CAGGAGGCCT CTGTGCTCCA TCCACGGCCA CCAGCCAACC CATGCAGCCT
  GCCCACCGAA CAAGCCGCCT GAGCTAGCCT AGGACTCTTG TCCCCGAGGG AACCCAACCA
  GAGCTCTCTC CTCCTACGCT TTTCCCTTCG GCCCCCAGGC CAGAGTCCGC ATTCTCAGCT
  CTTCCGTGAT ACAGCGACCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500233	CHEV_17_88225536	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241431744					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88133624 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9633	CpG island 9633	111 bp proximal
Cpgi9634	CpG island 9634	790 bp proximal
Gm50039	predicted gene, 50039	within coordinates
Rr532768	regulatory region 532768	within coordinates
Tssr146214	transcription start site region 146214	271 bp downstream