rs241443894 SNP Detail

Summary

• ID
  rs241443894
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:115817548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gacctgaag tgatgtggga aatggtggtg
  gatctgggag gagctacggg gaggagtggg aaatgcatat gatcaaaata cattgtatga
  ccttcttaaa gaattgacaa acatatattt ttaagagaaT GTAAGACCAC ATTTTTTTAA
  K
  ATTTGTCAGG CCAAATCACT TTACAAATGA ATGTAAATCC CTGACAAGAG TGGTCAGTGA
  CTTAACTGAA ACATAATGAC TGTATTTTAT TGCCGTCTCT ACTCCAGGGG TTGCCACATC
  TGCAAACTTC CGGGAAGAGT CATGGGGATT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320893972	CHEV_3_115726817	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241443894					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115817548 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Extl2	exostosin-like glycosyltransferase 2			Intron
				Noncoding-Transcript-Variant
Rr583641	regulatory region 583641			1911 bp proximal