rs241448919 SNP Detail

Summary

• ID
  rs241448919
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156194141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATTGGCAG TTCTGATTCT
  TTTTTTTTTT TTTTTGAGAC AGGGTTTCTC TATATAGCCC TGGCACTCAC TTTGTAGACC
  AGGCTGGCCT CGAACTCAGA AATCCGCCTG TCTCTGCCTT CCAGTGCTGG GATTAAAGGC
  GTGCGCCCCG ACACCCGGCT CCAGCTTTGA ATTCTTTTGT GACCCTCTTG GAGCGAGGCG
  K
  ACGTTACACT CCATAGCCTT GCTTAGAACC AAGGCCGGCC ACCTAACAAG GACTACGATG
  ATTGGCCGCC CCTAGAACTA TTGGGGAATG TAGTCGTTTC CTTCCCTCCC TAGGCTCAAG
  TCCTCTTGGA CTACATTTCC CAGTCAGCGC TGGGAACGCA AACCCGCTGC CAGGACGGAA
  TCCTGGGTAA ACGCACTTGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321445495	CHEV_4_155483793	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241448919					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156194141 () rs orientation: forward

Symbol	Name	Function Class
9430015G10Rik	RIKEN cDNA 9430015G10 gene	314 bp upstream
Cpgi15500	CpG island 15500	within coordinates
Gm69135	predicted gene, 69135	within coordinates
Rr398931	regulatory region 398931	56 bp upstream
Tssr40790	transcription start site region 40790	287 bp upstream
Tssr40791	transcription start site region 40791	329 bp upstream