rs241477401 SNP Detail

Summary

• ID
  rs241477401
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126812572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCC AACACCCAAC TCCAACCCCT
  R
  ACGCTCACCC CATTCAGGCC GTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322451252	CHEV_7_134356914	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241477401					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126812572 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19731	CpG island 19731	1196 bp proximal
Cpgi19732	CpG island 19732	1811 bp proximal
Mylpf	myosin light chain, phosphorylatable, fast skeletal muscle	within coordinates
Rr655746	regulatory region 655746	293 bp proximal
Septin1	septin 1	1047 bp downstream
Tssr69169	transcription start site region 69169	1689 bp downstream
Tssr69170	transcription start site region 69170	770 bp downstream
Tssr69171	transcription start site region 69171	763 bp downstream
Tssr69172	transcription start site region 69172	728 bp downstream
Tssr69173	transcription start site region 69173	537 bp downstream
Tssr69174	transcription start site region 69174	271 bp downstream
Tssr69175	transcription start site region 69175	252 bp downstream
Tssr69176	transcription start site region 69176	211 bp downstream
Tssr69177	transcription start site region 69177	197 bp downstream
Tssr69178	transcription start site region 69178	806 bp upstream
Tssr69179	transcription start site region 69179	850 bp upstream
Tssr69180	transcription start site region 69180	1132 bp upstream
Tssr74959	transcription start site region 74959	66 bp downstream
Tssr74960	transcription start site region 74960	787 bp downstream
Tssr74961	transcription start site region 74961	1346 bp downstream
Tssr74962	transcription start site region 74962	1614 bp downstream
Tssr74963	transcription start site region 74963	1643 bp downstream
Tssr74964	transcription start site region 74964	1685 bp downstream
Tssr74965	transcription start site region 74965	1929 bp downstream
Tssr74966	transcription start site region 74966	1979 bp downstream