rs241477470 SNP Detail

Summary

• ID
  rs241477470
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71304480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCAATTC TACCCCCAAC
  TCTTCCACAA GACTCCCAGA GCTCTGCCTG ATGTTTGGCT GTAGGTCTCT GTCTCTGTCT
  GCAGGCATAG CAGAATGTGT TGGGGGTGGG CTGTCTCACA TGAGACAGGT CTCAAATTGA
  GTCAGTCATT AGTTGGCTCT ACCTTCAATC TCTGCTCCAT CTTTATCACT GTACGTTTTG
  Y
  AGGCAGGACA AATTTGGGGT TAAAGGTGCT GTGGGTGGAT TGATATCCCT TCCCTCCACT
  GGAACTCCCT TTTGTAGGAT ATAAAGAAGG GTCCCAGCTT GGATGGTTCA TTCCAAGCAT
  CCCTTGCACC CTGTGCTGAG GTTTGTGGAG GGTGAAGCAT CCCAGGAACA TAGCCCTCGA
  TCCAGGAATT GGTATTAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323740838	CHEV_11_71227156	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241477470					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71304480 () rs orientation: forward

Symbol	Name	Function Class
Rr235995	regulatory region 235995	1521 bp proximal
Rr251370	regulatory region 251370	522 bp proximal
Rr386247	regulatory region 386247	825 bp upstream