rs241545507 SNP Detail

Summary

• ID
  rs241545507
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:144129683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATACCTCG TGCTTGGTAT
  CTCACAGTGT TCTTGGTTGG CCCCTGGGCT TAGCTCTTGG TACCTTTGGT GTTTTCTCTG
  AGGTGGAAGC TGGAGAGACC GGCATGTCCC TCCCCCAACC TGCTCATTAA TAAGGAGGGT
  GAGTGGTTGG CAGCCAGGCA GCCTCAAGCC CAGCTTCCGT CCTGGGGCGT TCCTGCCCCA
  A
  TGGCTCTGCC GGGCTTCACT TCAGACTACT TTGCTGTCAC TTGTCCTTGG CCTCTTCCTT
  CCTCCCTTGT CTCTCTGCCC AGAACTGACC TGGAGTTCCT TGAGGCCCAT ACACCCCACA
  CCCACCTTTA GAATGACAGG AGTCTCTCTC TATGTAGCTC AGGCTATCCC TAAACTGATT
  TTTTTGAACG TGTGCTTGGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321709370	CHEV_5_144953734	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241545507					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144129683 () rs orientation: forward

Symbol	Name	Function Class
Bhlha15	basic helix-loop-helix family, member a15	mRNA-UTR
Rr624360	regulatory region 624360	1620 bp proximal
Tecpr1	tectonin beta-propeller repeat containing 1	1577 bp downstream