rs241599820 SNP Detail

Summary

• ID
  rs241599820
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33024675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGGGGAA GGGGAAGGGA
  GGGGAGGGGA AGAGGAAGGG AGGGGAGGGG AGGAAGGAAA GAAAGAAAGA AAGGAAAGAA
  GGAAGAAAGA GGCTAGAGAG ATGACTCTAC GAGGCTGTCT GCTCTTCCAG AGGACCTAGG
  TTTAATTTCT AGTACCACAT TGTGTCTCAT AACTGTCTAT AACTATAGTT TCAGATAATC
  Y
  TATGCCCATT TCTGGCCCCT ACCAGTACCA GGCACACATA TGGTGCACAG CCAAACAGGC
  AGACAAAACA CCTATACAAA TAAGATAATA AAACAGTTTT TAAAAGATAA TCAGTAAAGT
  GTTTATGCTT AAATTCATCT ATATATACAG TTACATGGAT ATAAATATTA TCTACATGTG
  CTTACATTTT TATATTGTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325363791	CHEV_17_32942646	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241599820					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33024675 () rs orientation: forward

Symbol	Name	Function Class
A930009K04Rik	RIKEN cDNA A930009K04 gene	322 bp downstream
Gm55909	predicted gene, 55909	724 bp upstream
Tssr147401	transcription start site region 147401	within coordinates
Zfp811	zinc finger protein 811	within coordinates