rs241645140 SNP Detail

Summary

• ID
  rs241645140
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152018984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gaacggatt gactcttggg agttgttctc
  tgacctccac actcacacca tcgcccaaca catacacaTC GAATATACAA AATATAATTG
  AAAATGTATA AACATGAGCA TGGCTCTTCC CAGTGGATGC CAAGGGACGT GCGGAAAGGC
  Y
  GATGTGGGAA TGCATGTTGA AAAATACCGA AGCAggtact tgccctgcaa tctcagtgtt
  tgggaggctg aggcaggagg aggatttcaa ggccagcctg ggctatatcg tgcgactatc
  taggaaagga gcacacaaaC TTCAGATTTC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320562454	CHEV_2_152002800	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241645140					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152018984 () rs orientation: forward

Symbol	Name	Function Class
Gm75354	predicted gene, 75354	422 bp upstream
Rr374077	regulatory region 374077	within coordinates
Rr567308	regulatory region 567308	52 bp proximal
Rr567309	regulatory region 567309	433 bp proximal
Tssr20777	transcription start site region 20777	1939 bp downstream
Tssr20778	transcription start site region 20778	663 bp upstream