rs241655369 SNP Detail

Summary

• ID
  rs241655369
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:17151226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGTTTTCA AAATAATTGA
  GTGCATTTTT ATGGGTGTAG GGCTTGAGGA ATAGATGTCC CCATGTGATT CTTCCACTGC
  TGTAAAATAT AAAGGACAGT GTCAATGTGA GGTGTATACT TGGTTAGAGA AAAATGGATA
  TGTAAAGATG GAAGAGTTCA ATGAAGCACA TATTCTTCTT TGGGGCAAAA AATGGGGTTC
  Y
  TCACCTGTTC AGGGCTAGGG CCACTGGGCA AGGCAGACAT GGGGAGTTTG ACTGTGCCAT
  GGACCCCATG GAACTACTGG GTGGGCTTTG GACTGTGGCA AGCCACAGGA TCCCACTCTG
  GGTGTGAGGG AGGAGCAGTT TGGGTTCCCT GCATACCTGC TGGAATGGGG CTCTGACTTT
  CTGGCAACAC AGATGGAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325539566	CHEV_18_17176678	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241655369					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:17151226 () rs orientation: forward

Symbol	Name	Function Class
Gm58605	predicted gene, 58605	within coordinates
Rr344746	regulatory region 344746	1575 bp proximal
Tssr150151	transcription start site region 150151	893 bp upstream
Tssr152558	transcription start site region 152558	806 bp downstream