rs241698475 SNP Detail

Summary

• ID
  rs241698475
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131645351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggggtgtct gaagacagct acagtgtact
  catatataat aaataaataa atctttaaaa aaaaTACTGT CTTCTTATGT TGTTCACGAG
  CAGGCATAGA TGTGAGCAGG GCAAGGCTGG GTACACCTGC CACAGAAGCT GGTTCCACAC
  Y
  GATAAGGGTG AAAGCCCACC TCAGAGACTG TACAAAGAAC TGGGTAGACC AGAGAGAGGA
  GCCTAGTCAA CTTCCATCCA AGTACGGCTT GGGGAGACGA CTCTATTGTC ACAAGGGCCT
  TGTTCCCTCA GGGGCTCCAG GGTCACCAAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329082	CHEV_4_131473955	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241698475					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131645351 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14946	CpG island 14946	1277 bp distal
Cpgi14947	CpG island 14947	1671 bp proximal
Gm12992	predicted gene 12992	within coordinates
Gm68339	predicted gene, 68339	1649 bp downstream
Rr85750	regulatory region 85750	751 bp distal
Rr85751	regulatory region 85751	151 bp distal
Rr100127	regulatory region 100127	1750 bp distal
Rr100128	regulatory region 100128	449 bp proximal