rs241723636 SNP Detail

Summary

• ID
  rs241723636
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60961837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATCCCCTT ACAAAAAAAA
  GACAGACCTC AGAGAATGAG CCTGCTCCTT CTTCGTTCGT CTTCCTCTCC TCCCCCCCCC
  CCCCCCCCCC CCCCCCGAGA GACAGGGTTT CTCTGTGCAG CCCTGGCTGT CCTGGAACTC
  ACTCTGTAAA CCAGGCTGGC CTCAAACTCA GAAATCCGCC TGCCTCTGCC TCCCGAGTGC
  W
  GGGATTAAAG GCATGCACCA CCACTGCCTG GCAAGCCTGC TTCTTCTCAG TCACAGCAAA
  AAGACACTGT TTAGGTACAC CTTGTATGAA CTCTCTTTTG AGTGCCACCT TCTAGAAATG
  GGCTCTCAAT TTATGTTGCC TTGATCCTCA GACTTTTGAG CCTCCATAAC TGTCAGAGAA
  ATAGGTTTGT TGTTTATAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323327726	CHEV_10_60588806	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241723636					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60961837 () rs orientation: forward

Symbol	Name	Function Class
Gm55864	predicted gene, 55864	823 bp upstream
Rr219927	regulatory region 219927	1564 bp proximal
Sgpl1	sphingosine phosphate lyase 1	within coordinates