rs241726905 SNP Detail

Summary

• ID
  rs241726905
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137888199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTGGAAAC AAAAATTGCA TAAATAAGAG
  CTCTGCTTCT TTCCAAAGAT TCTGATTTAT TCTTTTTCCA GAAAAAGTTT GATTTATTCT
  AATATGTGTA TGCTTTTCAA TTTTCAAAGA TCAATTCATG TTGTTAAAAT TACTTTGAAT
  Y
  GTAGTTAACA TATCTGTCCT TTCCCAGTCA AGGGAGGAGT CAACTGTTAC ACAGTCTTGG
  ATCAAGGGCA GGACACTTAT TTTTGTTTTG TTTTGTTTCA TTTTCAtttt tattggttat
  tttatttatt gacatttaaa atgttacccc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319999616	CHEV_1_139857038	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241726905					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137888199 () rs orientation: forward

Symbol	Name	Function Class
C530045E16Rik	RIKEN cDNA C530045E16 gene	within coordinates
Gm4258	predicted gene 4258	within coordinates
Gm26936	predicted gene, 26936	within coordinates
Gm41959	predicted gene, 41959	within coordinates
Mir181a-1hg	Mir181a-1 and Mir181b-1 host gene	within coordinates
Tssr9129	transcription start site region 9129	34 bp upstream
Tssr9130	transcription start site region 9130	1009 bp upstream