rs241769533 SNP Detail

Summary

• ID
  rs241769533
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12328234 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGGTGG GGACACCTTC
  ACTGGGTGGT GACCATGGAA GACAGGCACC TGTGTCACAG AGAGCTCCTC AGAGGGGAGA
  GTAAGAGGTA GGGTCATACC CTGGCTTACT CAGAGCCCAG CTGCATTTGA GCCCAGTTGT
  TGTGTTCTTT TGTGTCATTT ATCTAAGGTT CCAGAGAACT AACCCTGAAG TTAGTAAGGG
  Y
  TGCCACATGT AACTCACTGT GCGGAGCTGG CTCTTGGTCA GCCCATTGTT TGGCTGTTTA
  TTTTTTGAGA ATTTTAATAT GGAGGGATTC ACACCAAATC AAAGCTGTCC CCTTGTAAGA
  TGCACACACA AATGGAGGCT TCGAAGAATC GACTTGAGGA CTCCCTGTGA GGTGTCCTAG
  AATCGGTCGC CCCTTCTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322497655	CHEV_8_12278234	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241769533					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12328234 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	591 bp upstream
Rr659697	regulatory region 659697	325 bp proximal