rs241772688 SNP Detail

Summary

• ID
  rs241772688
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97148242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGAAGAA GTACCAAGAC
  AGATGGCTGA GTGCCGTCTT GGGCTCTAAA GTGGGACAGA TGGATGGTCC TTTGGTCTCT
  CCGCGTGGTA TTTTCTATTG GTATTTTTGA CCGTTTGATG ATGATGACTC CAGTGGATAG
  TAGGAAGTGG CTTCAGGGTA TGATCTGATT TTGAATCTGG TGGGCTGAGA TGGGCGTGGC
  Y
  GTGGTTCACC TTCCTGGCTT TGGAAGGCTC TCCCGTCTGG AGGGTGTGAT TGAGATGAGG
  TCTCGGGTTC TAGCTCTGTG GTTTCCAATT TCTCAGGTTG TATTTTAAAA TCTTGAAGAG
  TTAGAGATCA AGGGCAAGGC ATGATTATAG CAGTGGTGTA TTCGATTGCT CTAGGGGAGC
  AGAACTCATA CAGTGAATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076421	CHEV_15_97080792	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241772688					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97148242 () rs orientation: forward

Symbol	Name	Function Class
Gm57814	predicted gene, 57814	1199 bp upstream
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr305670	regulatory region 305670	842 bp distal
Rr308785	regulatory region 308785	442 bp distal
Rr308786	regulatory region 308786	1159 bp proximal
Rr312356	regulatory region 312356	1441 bp distal