rs241783209 SNP Detail

Summary

• ID
  rs241783209
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4622693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctagcttgg ggaaactggc taggtttcag
  tcatgacttc ccttttgtta aagaaagggt tttgcattca attagacagt tgttgactat
  catcaacatg tgaatgcctc ttatacacct ttacagacat cttgtcttgg catgctgccc
  R
  ttgtcctaga tcataggtgt tatgggtgtg tagaactAAG TGCATGGTGT CTTCAGCAAT
  GGAGCTCAGA CCCATTGAGC TTTTTAAGTT TCTAAAAGAG CAGTGAATgg aggggagggg
  gaggggaggg aaggagagga gagAATTAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727632	CHEV_6_4572693	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241783209					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4622693 () rs orientation: forward

Symbol	Name	Function Class
Casd1	CAS1 domain containing 1	within coordinates
Tssr54761	transcription start site region 54761	1209 bp upstream
Tssr54762	transcription start site region 54762	1262 bp upstream