rs241815631 SNP Detail

Summary

• ID
  rs241815631
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105721021 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGTTCAA GTCTCAGCAA
  CTACCTTGTG ACTCACAACC ATCTGTAATG GGACCCAATG TGCTCTTCTG GTGTGTCTGA
  GTTCAACTAC AGCTACTCAT ATAAATAAAA GTAAATAACT CTTTTAAAAA AATGAAATCA
  AAACAATCGC CTAAAGCCAT AGAAATGAAA TCTAGTAAAA AAAAAATCGA AGAATAATTA
  R
  CAAAGAGTCT TGATTTAAAA CAGACACAGG ATTGTGGTCT CCTTTCATGG CAGCCTGCTT
  ACCCAGCTGT TCTCCTTGCC TTTTCATCAT AGCTACCAAG TCCTGGAGTG CAGGATCAGT
  CATGGCTGCT TTCAGGGCAA GTGCTTGGTG GCACTAAGCA CTCAGCTTGC CCATGGTGCT
  GACAGTGACA TCTTCGCAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863266	CHEV_3_105616623	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241815631					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105721021 () rs orientation: forward

Symbol	Name	Function Class
Gm5547	predicted gene 5547	1862 bp upstream
Rr582787	regulatory region 582787	1370 bp proximal
Rr582788	regulatory region 582788	1885 bp proximal
Tssr31084	transcription start site region 31084	1825 bp upstream