rs241908775 SNP Detail

Summary

• ID
  rs241908775
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:67973320 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTC CCCTCCCCCC AGTCCCCCAC
  C
  CCACCCAGCA TAGTCTTTGT ATTCT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323351602	CHEV_10_67600238	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241908775					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:67973320 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Cpgi1679	CpG island 1679	797 bp distal
Rr384864	regulatory region 384864	within coordinates
Rr433197	regulatory region 433197	875 bp distal
Rr433198	regulatory region 433198	935 bp distal
Rr433199	regulatory region 433199	374 bp distal
Rr433200	regulatory region 433200	689 bp proximal
Rr433201	regulatory region 433201	1770 bp proximal
Tssr3230	transcription start site region 3230	754 bp upstream
Tssr3231	transcription start site region 3231	733 bp upstream
Tssr3232	transcription start site region 3232	656 bp upstream
Tssr93877	transcription start site region 93877	463 bp downstream
Tssr93878	transcription start site region 93878	292 bp upstream
Tssr97991	transcription start site region 97991	878 bp upstream
Tssr97992	transcription start site region 97992	866 bp upstream
Tssr97993	transcription start site region 97993	852 bp upstream
Tssr97994	transcription start site region 97994	813 bp upstream
Tssr97995	transcription start site region 97995	794 bp upstream
Tssr97996	transcription start site region 97996	782 bp upstream
Tssr97997	transcription start site region 97997	768 bp upstream
Tssr97998	transcription start site region 97998	708 bp upstream
Tssr97999	transcription start site region 97999	282 bp upstream
Tssr98000	transcription start site region 98000	116 bp upstream