rs241924898 SNP Detail

Summary

• ID
  rs241924898
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32877932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATCTTGT CTTTGGAAGG
  GCAGGAGGGG CAATAAAGGT GGGGTTCAAT GTCGCCTTTG GCCATACCAG TCTTATCTCC
  TCCCTCATGT GGGAGGAGTT AAGTCCTGAG GATCTCTTTT CCATGCTCAG TGTGACCCTG
  ACTTGGTTTC ACTGTGCAGC TGGCTTACTA AACCTCCTTT CTTGGCCTCA TGCCCAGGCC
  W
  GGAGGAAACT GTCAGATCTG GGAAGGTTTG GCTGGCACAC ATGAGCCCAG CCTTCCATTG
  CTTCCTTTAG GCACTTATCC AAAGAGGCCC CAGAAGAAAG AGATTGAGGT GCTGCAGAAG
  AATCGCCACT CCTGAGAGAA GGTGCCAAGC TAGGGAAAGT GGAGCTCCAG GGTACTATCC
  TGGTTTGAGA GAGCCCTGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362712	CHEV_17_32795903	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241924898					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32877932 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f40	cytochrome P450, family 4, subfamily f, polypeptide 40	within coordinates
Gm65897	predicted gene, 65897	277 bp upstream
Tssr143725	transcription start site region 143725	45 bp downstream
Tssr143726	transcription start site region 143726	8 bp upstream
Tssr143727	transcription start site region 143727	31 bp upstream
Tssr143728	transcription start site region 143728	51 bp upstream
Tssr143729	transcription start site region 143729	63 bp upstream
Tssr143730	transcription start site region 143730	86 bp upstream
Tssr143731	transcription start site region 143731	108 bp upstream
Tssr143732	transcription start site region 143732	122 bp upstream