rs241941465 SNP Detail

Summary

• ID
  rs241941465
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34485845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGTGTGC
  TGTGGTGTGC ATGGGGGTGT CAGAGGACAG CTTGCCAGAG TCAATTTTCT CCTTTTACCA
  TGAAGGTCCA GGGATCAAGG TTGGGTCTTC AGGCTTGGCA GCAAGCACTG CTAACCACTG
  AGCCCTCTCA CCAGCCTGAG ATTAATATTT ATATTTTTGT GTTGCCTGTG ACTGGATATG
  Y
  TTTGGGCCCT AGGGAGGAGG AGTGAGAGTG GACTCCCATA CTGGTCCACC TGCTCACACA
  AAGGCTGCAT AGACTGACAT ACTCAGTCAC AGAAATGACT CTGCTCATCA GAGGTGGCTC
  TGTCTGAGGT TCATGCAGAG CCACCTGAAG GACCCTGCCA AATATCCAAC TATGTTTTCA
  TGGAGAAATG AGATAATGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701744	CHEV_3_34330618	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241941465					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34485845 () rs orientation: forward

Symbol	Name	Function Class
Gm20515	predicted gene 20515	within coordinates
Rr575127	regulatory region 575127	967 bp proximal