rs241946732 SNP Detail

Summary

• ID
  rs241946732
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:69557447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTTGAA TAACCAAGAT
  TTTCCCAAAC TTTCTTTGGG CCCTACGATT GTCTCTGTTT TCAGAAAAGA AATTCAGTAT
  TCATGCACGT CATTTTGAAA TTATTTTAAT CTAAAAATGC CAATGCTAGG CATGCAGAGC
  AAGTGCTAAG CAAGCATGAG GGAATGCAAA AATGCATGAG AAACAGTGTC TTGCCCTCTA
  R
  GAACTCAAGG AAAGTTGATA GGGAAAAGAT GAAGATAGTC ATAGAAAACC AAGTAAACAG
  TTGTGGGGGG AGGGGGTTAT CCTTCATTCT ATACTAATGG GACATTCCAG TTTTAGCATC
  ATGTACCAAG CAGTTGATTA AAATGGTCTC TCTTGGGAGC AGCTCAGAAA TGGAGGAGGT
  GGCTGTGGTC ATAACAACCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss371794293	MGP_WTSI_7_77052585	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs241946732					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss371794293	MGP_WTSI_7_77052585	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:69557447 () rs orientation: forward

Symbol	Name	Function Class
Gm73408	predicted gene, 73408	1137 bp upstream
Gm73423	predicted gene, 73423	883 bp downstream
Tssr72890	transcription start site region 72890	350 bp downstream
Tssr72891	transcription start site region 72891	361 bp downstream
Tssr72892	transcription start site region 72892	388 bp downstream
Tssr72893	transcription start site region 72893	1849 bp downstream
Tssr72894	transcription start site region 72894	1858 bp downstream
Tssr72895	transcription start site region 72895	1878 bp downstream
Tssr72896	transcription start site region 72896	1896 bp downstream
Tssr72897	transcription start site region 72897	1933 bp downstream