rs241954294 SNP Detail

Summary

• ID
  rs241954294
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122362788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAAAACAGG CATAATGTTA AAGAAAATAA TGATCATCTT
  CACAGAACTC ACTCTTCTAT AGAAAGTCGG CTAACAAGCA TCACATATTT TAGGCTTGCA
  Y
  AGCAAACAGC ACTGTCGACA ACTGTGTAGC CTTAGCAATG AATGCAGACT AAATCCGACT
  CTATGGACAC TCAAATTCGA ATTTTATAAA ATTTTATAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320912824	CHEV_3_122272057	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241954294					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122362788 () rs orientation: forward

Symbol	Name	Function Class
Fnbp1l	formin binding protein 1-like	within coordinates
Gm43569	predicted gene 43569	within coordinates
Rr74164	regulatory region 74164	415 bp distal
Tssr35455	transcription start site region 35455	331 bp upstream
Tssr35456	transcription start site region 35456	571 bp downstream