rs241973617 SNP Detail

Summary

• ID
  rs241973617
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31095696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTCTGG AAGTAGAATA
  TAGTGATAAC CTCTGATAAG TCCCTAACGC TATTGCTTCC TCTCTGCTGC TGGCCAAAAG
  CACCTTAGGG GAAGACAGGT TTCATTTGGA TTACAGTTCC AGGTCACACA GTCCATCACT
  GAGGGGAGTC ATAGTAGGAA GTGTTCCTAC TCGAACCATG CATGATCATT GCCTGCCTCT
  S
  TGGCTTCTTC ACAGGCTCAT GCTTGCTTTA GATAGTTTTC TCAGACAGCT CAAGACCACT
  TGCCTAGGGA TGGCACCGCC CACAGTGGGC AGACCTCAAA ACAAATGTCT ATAGACCAGC
  TTGATAAAGA CTCCATGACA TTTTTGATTG TTTGTTTGTT TGAATTTCAG GTGATTCTAT
  GTTGTGTCAA ATTAACAGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325357671	CHEV_17_31013667	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241973617					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31095696 () rs orientation: forward

Symbol	Name	Function Class
Dnah8	dynein, axonemal, heavy chain 8	960 bp downstream
Gm9937	predicted gene 9937	1438 bp upstream
Gm50252	predicted gene, 50252	within coordinates
Rr330583	regulatory region 330583	1896 bp distal
Rr334765	regulatory region 334765	1705 bp proximal
Rr337287	regulatory region 337287	844 bp proximal
Rr341200	regulatory region 341200	1696 bp distal
Tssr147267	transcription start site region 147267	1686 bp upstream