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rs241973617 SNP Detail
Summary
  • ID
    rs241973617
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr17:31095696 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TTCCTTCTGG AAGTAGAATA
    TAGTGATAAC CTCTGATAAG TCCCTAACGC TATTGCTTCC TCTCTGCTGC TGGCCAAAAG
    CACCTTAGGG GAAGACAGGT TTCATTTGGA TTACAGTTCC AGGTCACACA GTCCATCACT
    GAGGGGAGTC ATAGTAGGAA GTGTTCCTAC TCGAACCATG CATGATCATT GCCTGCCTCT
    S
    TGGCTTCTTC ACAGGCTCAT GCTTGCTTTA GATAGTTTTC TCAGACAGCT CAAGACCACT
    TGCCTAGGGA TGGCACCGCC CACAGTGGGC AGACCTCAAA ACAAATGTCT ATAGACCAGC
    TTGATAAAGA CTCCATGACA TTTTTGATTG TTTGTTTGTT TGAATTTCAG GTGATTCTAT
    GTTGTGTCAA ATTAACAGTG                                            
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss325357671 CHEV_17_31013667 CHEVERUD SCREENING_POP f SNP G C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs241973617 SNP G C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr17:31095696 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Dnah8 dynein, axonemal, heavy chain 8 960 bp downstream
Gm9937 predicted gene 9937 1438 bp upstream
Gm50252 predicted gene, 50252 within coordinates
Rr330583 regulatory region 330583 1896 bp distal
Rr334765 regulatory region 334765 1705 bp proximal
Rr337287 regulatory region 337287 844 bp proximal
Rr341200 regulatory region 341200 1696 bp distal
Tssr147267 transcription start site region 147267 1686 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory